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Use the apply-build-vars make macro to replace the @xxx@ markers in most *.in files only at build time. As some of the markers are local to tools/configure, introduce config/Tools-paths.mk.in and add the related make variables to it. Add Tools-paths to the PATH_FILES make variable in order to include the definitions for replacing them in the *.in files. Add the generated files to the distclean target. Signed-off-by: Juergen Gross <jgross@suse.com> Reviewed-by: Andrew Cooper <andrew.cooper3@citrix.com>